Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015916352.1_cds_XP_016466056.1_58954
CDS Infomation

[gene=LOC107788841] [db_xref=GeneID:107788841] [protein=L-2-hydroxyglutarate dehydrogenase, mitochondrial] [protein_id=XP_016466056.1] [location=complement(join(36060..36173,36539..36698,38348..38781,38972..39253,40597..40884))] [gbkey=CDS]
Sequence

ATGTTGGGGACGATGAAACCTACAAACTCAATCACAAAAACAATATCCCATAAACTCAAG
AATATCAGCAGAACCCCATTATCATCATCATCAATTCCAAAGGAGAAGGTGGATTGTTTG
GTAATAGGGGCTGGTGTAGTGGGCATAGCAGTGGCTAAAGAGCTTAGTGTGAAGCATGGC
AGAGAAGTTTTGGTGGTTGATTCTGCCCCAACTTTTGGGACTGGTACCAGTTCTCGCAAT
AGTGAAGTTATTCATGCTGGCATTTATTATCCTCCTAATTCTCTCAAGGCATTTTTCTGT
GTTAGAGGGAAAGAATTGCTCTACAAGTATTGCAAAGATCATGAAGTTCCACACAAGCAG
ATAGGCAAGCTTATAGTTGCTAATGGTTTATCAGAGATTCCAAAGTTGAGTGCTCTCATG
ACTCGAGGAATTCAAAATGGGGTTGAGAGTCTGACGATGATGGACAGTTATGAAGCTATG
ACACTGGAGCCTGAATTGCAATGTCTTAAAGCTTTATGGTCACCTTCCTCGGGAATAGTT
GATAGCCATTCATTGATGCTATCATTGGTGGGCGAAGCTGAAAGTCACGGCACGACTTTC
TCCTACAATACTGCGGTTATTGGTGGTCATATTGAAGGAAATGAAATTCAAATTCATGTT
TCTGGGAGCAATGCTATTGCAAACTGGAATGGGAGGTCCGAATTGGACTCTGAACTAATT
CTTGTTCCCAAGCTTGTCGTAAATTCTGCAGGCTTAAGCGCTCCAGCCATTGCAAAACGA
ATGAAAGGCCTACCTAATGGTATTATTCCTGCTTCTCACTATGCTCGTGGTTGCTACTTC
ACCCTGTCAAACACTAAATCCCCTTTCAAGCACTTGATTTATCCTATACCTGAGGTTGGT
GGCCTTGGAGTGCATGTGACCTTGGATTTGAATGGCCAAGTCAAATTTGGTCCTGATGTT
GAATGGATAGAAGGAATTCATGATATTCCGAGCTTCCTCAACATGTTTGATTATTCTGTG
CGTGAAGACCGTGCAAAGCAATTCTACCCAGCGATAAGAAAATACTACCCTGGTCTGAAG
GATGGATCTTTGGAGCCAGGTTATGCAGGCATCAGACCAAAGCTTTCTGGTCCAGAAGAG
GGGTCTACAGATTTTGTAGTTCAGGGAGAGGACATTCATGGTATATCTGGTTTAGTTAAC
TTGTTTGGGATTGAATCCCCAGGCCTAACTTCCTGTATGGCTATTGCGGAGCATGTTGCA
GCTAAATTACTGAAATAA

Peptide Sequence

PEP ID

XP_016466056.1
PEP Infomation

PREDICTED: L-2-hydroxyglutarate dehydrogenase, mitochondrial [Nicotiana tabacum]
Sequence

MLGTMKPTNSITKTISHKLKNISRTPLSSSSIPKEKVDCLVIGAGVVGIAVAKELSVKHG
REVLVVDSAPTFGTGTSSRNSEVIHAGIYYPPNSLKAFFCVRGKELLYKYCKDHEVPHKQ
IGKLIVANGLSEIPKLSALMTRGIQNGVESLTMMDSYEAMTLEPELQCLKALWSPSSGIV
DSHSLMLSLVGEAESHGTTFSYNTAVIGGHIEGNEIQIHVSGSNAIANWNGRSELDSELI
LVPKLVVNSAGLSAPAIAKRMKGLPNGIIPASHYARGCYFTLSNTKSPFKHLIYPIPEVG
GLGVHVTLDLNGQVKFGPDVEWIEGIHDIPSFLNMFDYSVREDRAKQFYPAIRKYYPGLK
DGSLEPGYAGIRPKLSGPEEGSTDFVVQGEDIHGISGLVNLFGIESPGLTSCMAIAEHVA
AKLLK

Transcript Sequence

Gene sequence data has not been registered.